Package: FunCC 1.0
FunCC: Functional Cheng and Church Bi-Clustering
The FunCC algorithm allows to apply the FunCC algorithm to simultaneously cluster the rows and the columns of a data matrix whose inputs are functions.
Authors:
FunCC_1.0.tar.gz
FunCC_1.0.zip(r-4.5)FunCC_1.0.zip(r-4.4)FunCC_1.0.zip(r-4.3)
FunCC_1.0.tgz(r-4.4-any)FunCC_1.0.tgz(r-4.3-any)
FunCC_1.0.tar.gz(r-4.5-noble)FunCC_1.0.tar.gz(r-4.4-noble)
FunCC_1.0.tgz(r-4.4-emscripten)FunCC_1.0.tgz(r-4.3-emscripten)
FunCC.pdf |FunCC.html✨
FunCC/json (API)
| # Install 'FunCC' in R: |
| install.packages('FunCC', repos = c('https://agostino-torti.r-universe.dev', 'https://cloud.r-project.org')) |
- funCCdata - Simulated data
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 4 years agofrom:220b3adc80. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Sep 09 2024 |
| R-4.5-win | OK | Sep 09 2024 |
| R-4.5-linux | OK | Sep 09 2024 |
| R-4.4-win | OK | Sep 09 2024 |
| R-4.4-mac | OK | Sep 09 2024 |
| R-4.3-win | OK | Sep 09 2024 |
| R-4.3-mac | OK | Sep 09 2024 |
Exports:find_best_deltafuncc_biclustfuncc_show_bicluster_coveragefuncc_show_bicluster_dimensionfuncc_show_bicluster_hscorefuncc_show_block_matrixfuncc_show_results
Dependencies:additivityTestsbiclustclassclicolorspacecpp11crayondplyrfansifarverflexclustgenericsggplot2gluegtablehmsisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmodeltoolsmunsellnarraynlmepillarpkgconfigplyrprettyunitsprogresspurrrR6RColorBrewerRcppreshaperlangscalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Functional Cheng and Church Algorithm varying the delta value | find_best_delta |
| Functional Cheng and Church algorithm | funcc_biclust |
| plotting coverage of each bi-cluster | funcc_show_bicluster_coverage |
| plotting dimensions of each bi-cluster | funcc_show_bicluster_dimension |
| plotting hscore of each bi-cluster on bicluster dimension | funcc_show_bicluster_hscore |
| Plotting co-clustering results of funCC on the data matrix | funcc_show_block_matrix |
| Plotting co-clustering results of funCC | funcc_show_results |
| Simulated data | funCCdata |
